BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F01SP1|AL429424
(310 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 575 e-164
>3x_Contig1741
Length = 21706
Score = 575 bits (285), Expect = e-164
Identities = 292/299 (97%)
Strand = Plus / Plus
Query: 12 gatctagacctaacattattatttcccgcagcagaagctgcatccagttcgtattckaac 71
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 7064 gatctagacctaacattattatttcccgcagcagaagctgcatccagttcgtattctaac 7123
Query: 72 ttcccaggttcttctggagtkattgtctgcattcttcctcttgtatccacacttgaactg 131
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 7124 ttcccaggttcttctggagttattgtctgcattcttcctcttgtatccacacttgaactg 7183
Query: 132 gcactattacaagtagactcacttttatcactcctcgacctaagtgtacgcatctgctct 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7184 gcactattacaagtagactcacttttatcactcctcgacctaagtgtacgcatctgctct 7243
Query: 192 tcaaaactcaaagggagcgcagtgacctatgaccgagagcyctgakataaaavakcttga 251
|||||||||||||||||||||||||||||||||||||||| |||| |||||| | |||||
Sbjct: 7244 tcaaaactcaaagggagcgcagtgacctatgaccgagagctctgatataaaaaatcttga 7303
Query: 252 taagcttattaagctcttctcgcttttaaacttgttctcagttctctttaaaccwctgc 310
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7304 taagcttattaagctcttctcgcttttaaacttgttctcagttctctttaaacctctgc 7362
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1558
Number of Sequences: 1807
Number of extensions: 1558
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 310
length of database: 10,358,551
effective HSP length: 15
effective length of query: 295
effective length of database: 10,331,446
effective search space: 3047776570
effective search space used: 3047776570
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)